chemistry

Stereochemistry & Molecular Chirality

The three-dimensional arrangement of atoms in molecules — chirality centers, optical activity, conformational analysis, enantiomer resolution, and Fischer projections for carbohydrate stereochemistry.

stereochemistrychiralityenantiomersoptical rotationconformational analysisFischer projectionorganic chemistry

Stereochemistry studies how the spatial arrangement of atoms within molecules affects their chemical behavior and biological activity. A single swap of two substituents at a chiral center can transform a life-saving drug into a toxic compound, making stereochemical understanding essential for pharmaceutical design, catalysis, and biochemistry.

These simulations let you assign R/S configurations using Cahn-Ingold-Prelog priority rules, measure optical rotation with a virtual polarimeter, analyze conformational energy landscapes through Newman projections, resolve enantiomers with chiral agents, and convert between Fischer projections and three-dimensional structures — all with real-time interactive controls.

5 interactive simulations

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Chirality Center: R/S Configuration & CIP Rules

Assign R/S configuration at a chiral center using Cahn-Ingold-Prelog priority rules with interactive 3D-style visualization

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Conformational Analysis & Newman Projections

Visualize Newman projections and rotational energy barriers for ethane and substituted alkanes with animated dihedral rotation

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Enantiomer Separation & Chiral Resolution

Simulate chiral resolution methods and calculate enantiomeric excess from chromatographic peak areas with real-time visualization

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Fischer Projection & Sugar Stereochemistry

Build Fischer projections of aldoses and explore D/L notation with interactive carbon chain configuration and sugar classification

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Optical Rotation & Polarimetry

Measure specific rotation and optical activity of chiral compounds using a virtual polarimeter with animated light polarization